Publications

Reiter, M.A., Mash, L.E., Linke, A.C., Fong, C.H., Fishman, I. & Müller, R.-A. (in press) Distinct patterns of atypical functional connectivity in lower-functioning autism. Biological Psychiatry Cognitive Neuroscience and Neuroimaging.

Jao Keehn, R.J., Nair, S., Pueschel, E.B., Linke, A.C., Fishman, I. & Müller, R.-A. (in press). Atypical local and distal patterns of occipito-frontal functional connectivity are related to symptom severity in autism. Cerebral Cortex

Fishman, I., Linke, A., Hau, J., Carper, R., & Müller, R.-A. (in press). Atypical functional connectivity of amygdala related to reduced symptoms severity in children with autism. Journal of the American Academy of Child & Adolescent Psychiatry.

Linke, A.C., Roach-Fox, E., Vriezen, E., Prasad, A.N., & Cusack, R. (in press). Altered activation and functional asymmetries of Exner's Area but not the Visual Word Form Area in a child with sudden-onset of persistent mirror writing. Neuropsychologia

Cusack, R., Wild, C., Zubiaurre-Elorza, L., & Linke, A.C. (2018). Why does language not emerge until the second year? Hearing Research. pdf

Linke, A.C., Wild, C., Zubiaurre-Elorza, L, Duffy, H., Herzmann, C., Han, V., Lee, D.S.C., & Cusack, R. (2018). Disruption to functional networks in neonates with perinatal brain injury predicts motor skills at 8 months. Neuroimage Clinical. pdf

Abbott, A.E., Linke, A.C., Nair, A., Jahedi, A., Alba, L.A., Keown, C.L., Fishman, I. & Müller, R.A. (2018). Repetitive behaviors in autism are linked to imbalance of corticostriatal connectivity: A functional connectivity MRI study. Social Cognitive Affective Neuroscience. pdf

Zubiaurre-Elorza, L., Linke, A.C., Herzmann, C., Wild, C.J., Duffy, H., Lee, D.S.C., Han, V.K., & Cusack R. (2018). Auditory structural connectivity in preterm and healthy term infants during the first postnatal year. Developmental Psychobiology. pdf

Mash, L.E., Reiter, M.A., Linke, A.C., Townsend, J. & Müller, R.-A. (2017) Multimodal Approaches to Functional Connectivity in Autism Spectrum Disorders: An Integrative Perspective. Developmental Neurobiology. pdf

Cusack, R., McCuaig, O., & Linke, A.C. (2017). Methodological challenges in the comparison of infant fMRI across age groups. Developmental Cognitive Neuroscience. pdf

Linke, A.C., Olson, L., Gao, Y., Fishman, I., & Müller, R-A. (2017). Psychotropic medication use in autism spectrum disorders may affect functional brain connectivity. Biological Psychiatry. Cognitive Neuroscience and Neuroimaging. pdf

Herzmann, C., Zubiaurre-Elorza, L., Linke, A.C., Wild, C., Han, V.K., Lee, D.S.C., & Cusack, R. (2017). Using MRI to detect preserved function in a preterm infant with brain injury: A case report. The Journal of Pediatrics. pdf

Wild, C., Linke, A.C., Zubiaurre-Elorza, L., Herzmann, C., Duffy, H., Han, V.K., Lee, D.S.C., & Cusack, R. (2017). Adult-like cortical auditory processing of sung lullabies by 3- and 9-months old infants. NeuroImage. pdf

Lo, M., Zubiaurre-Elorza, L., Wild, C.J., Linke, A.C., Lee, D.S.C, Han, V.K., & Cusack, R. (2017). Brainstem shape is affected by clinical course in the Neonatal Intensive Care Unit. NeuroImage: Clinical. pdf 

Linke, A.C., Jao Keehn, R.J., Pueschel, E., Fishman, I., & Müller, R.-A. (2017). Children with ASD show links between aberrant auditory processing, social symptoms, and atypical inter hemispheric and thalamocortical functional connectivity. Developmental Cognitive Neuroscience. pdf 

Cusack, R., Linke, A.C., Zubiaurre-Elorza, L., Duffy, H., Herzmann, C., Stojanoski, B., Han, V., Lee, D.S.C., & Wild, C. (2017). Differences in the spatial and temporal patterns of head motion during MRI of adults and infants. bioRxivpdf 

Clay, D.E., Linke, A.C., Cameron, D.J., Stojanoski, B., Rulisa, S., Wasunna, A., de Ribeaupierre, S., & Cusack, R. (2016). Evaluating affordable cranial ultrasonography in East African Neonatal Intensive Care Units. Ultrasound in Medicine & Biology. pdf 

Cusack, R., Wild, C., Linke, A.C., Arichi, T., Lee, D.S.C., & Han, V.K. (2015). Optimizing stimulation and analysis protocols for neonatal fMRI. PLOS One. pdf

Linke, A.C., & Cusack, R. (2015).  Flexible information coding in human auditory cortex during perception, imagery, and short-term memory of complex sounds. Journal of Cognitive Neuroscience. pdf

Cusack, R., Vicente-Grabovetsky, A., Mitchell, D.J., Wild, C., Auer, T., Linke, A.C., & Peelle, J.E. (2015). Automatic analysis: efficient neuroimaging workflows and parallel processing in Matlab and XML on your cluster or in the cloud. Frontiers in Neuroinformatics, 8 (90). pdf

Cusack, R., & Linke, A.C. (2015). Neuroimaging of the mind's ear using representational similarity analysis. Attention & Performance XXV. Mechanisms of Sensory Working Memory. Eds Pierre Jollicoeur & Christine Lefebvre. Chapter 18, 229-237. 

Cusack, R., Stojanoski, B., Tran, M.C., Linke, A.C., & Wild, C.J. (2013). Pubmed Commons commentary on Mueller, J.L., Friederici, A.D., & Männel, C. (2012). Auditory perception at the root of language learning. Proceedings of the National Academy of Sciences, 109, 15953-15957. pubmed

Cusack, R., Veldsman, M., Naci, L., Mitchell, D. J., & Linke, A.C. (2012). Seeing Different Objects in Different Ways: Measuring Ventral Visual Tuning to Sensory and Semantic Features With Dynamically Adaptive Imaging. Human Brain Mapping, 33 (2), 387-397. pdf

Linke, A.C., Vicente-Grabovetsky, A., Cusack, R. (2011). Stimulus-specific suppression preserves information in auditory short-term memory. Proceedings of the National Academy of Sciences of the United States of America, 108 (31), 12961-12966. pubmed

Linke, A.C., Vicente-Grabovetsky, A., Mitchell, D.J., Cusack, R. (2011). Encoding strategy accounts for individual differences in change detection measures of VSTM. Neuropsychologia, 49 (6), 1476-1486. pubmedpdf

 

Conference Presentations & Talks

Mash, L.E., Linke, A.C., Fong, C.H., Falahpour, M., Liu, T.T., & Mueller, R.-A. "Dynamic fcMRI reveals transient atypical connectivity patterns in adolescents with Autism Spectrum Disorders". International Society for Autism Research, Annual Meeting, Rotterdam, Netherlands, 2018. 

Olsen, L., Linke, A.C., Mash, L.E., Reiter, M.A., Mueller, R.-A., & Fishman, I. "Broadly reduced intrinsic functional connectivity in girls compared to boys with Autism Spectrum Disorders". International Society for Autism Research, Annual Meeting, Rotterdam, Netherlands, 2018. 

Reiter, M.A., Mash, L.E., Liu, J., Fong, C.H., Linke, A.C., Fishman, I., & Mueller, R.-A. "Altered resting-state functional connectivity in individuals with ASDs and impaired cognitive functioning". International Society for Autism Research, Annual Meeting, Rotterdam, Netherlands, 2018. 

Cabral, L.M., Zubiaurre, L., Wild, C.J., Linke, A.C., & Cusack, R. "Don't represent what you cannot handle: Connectivity of category-specific regions in infants". Society for Neuroscience, Annual Meeting, Washington D.C., 2017.

Gao, Y, Linke, A.C., Jahedi, A., Punyamurthula, S., Fong, C., Fishman, I., & Müller, R.-A. "Language network connectivity indicates subgroups in children with autism spectrum disorders". Organization for Human Brain Mapping Annual Meeting, Vancouver, Canada, 2017. 

Linke, A.C. "Recent experiences using SMS imaging in BOLD fMRI studies". Morning Symposium "High resolution fMRI via multiband (SMS) acquisition: opportunities and limitations". Organization for Human Brain Mapping Annual Meeting, Vancouver, Canada, 2017.

Kinnear, M., Linke, A.C., Solders, S., Carper, R., & Müller, R.-A. "Impaired motor function and atypical motor cortex connectivity in mature adults with autism spectrum disorder". Society of Biological Psychiatry Annual Meeting, San Diego, California, 2017. 

Reynolds, S., Linke, A.C., Müller, R.-A., & Fishman, I. "Effects of heart rate regressors on functional connectivity in ASDs". Society of Biological Psychiatry Annual Meeting, San Diego, California, 2017. 

Reiter, M., Gao Y., Linke, A.C., Keehn, R.J.J., Fishman, I., & Müller, R.-A. "Underconnectivity between anterior and posterior default mode nodes in individuals with ASD and low cognitive ability". Society of Biological Psychiatry Annual Meeting, San Diego, California, 2017. 

Linke, A.C., Jao Keehn, R.J., Pueschel, E., & Müller, R.-A. "Auditory thalamocortical over connectivity in autism is related to altered topographic organization of auditory cortex". Nanosymposium Talk. Society for Neuroscience, Annual Meeting, San Diego, California, 2016.

Harikumar, A., Linke, A.C., Berkebile, M., Fong, C., Zhao, W., Fishman, I., & Müller, R.-A. "Amplitude of resting state low frequency BOLD fluctuations in autism". Nanosymposium Talk. Society for Neuroscience, Annual Meeting, San Diego, California, 2016.

Jahedi, A., Meeni, V., Linke, A.C., Nair, S., Chen, P., Bailey, B.B., & Müller, R.-A. "Resting state fMRI connectome differentiates autism from typical development". Society for Neuroscience, Annual Meeting, San Diego, California, 2016.

Macari, A.C., Berkebile, M., Linke, A.C., Zhao, W., & Müller, R.-A. "Domain specificity of altered cortico-striatal functional connectivity in children and adolescents with autism". Nanosymposium Talk. Society for Neuroscience, Annual Meeting, San Diego, California, 2016.

Roach-Fox, E., Linke, A.C., Cusack R., Vriezen, E., & Prasad, A. "Unravelling the da Vinci code through neuroimaging: Sudden-onset mirror writing in a healthy child". Human Brain Mapping Annual Meeting, Geneva, Switzerland, 2016. 

Ropat, J., Linke, A.C., Wild, C., Herzmann, C., Duffy, H., Lee, D., & Han, V., & Cusack, R. "Connectivity in the motor network matures before the emergence of complex motor behavior". Canadian National Perinatal Research Meeting, Banff, Canada, 2016. 

Linke, A.C., Wild, C., Zubiaurre-Elorza, L., Herzmann, C., Duffy, H., Lee, D.S.C., Han, V., & Cusack, R. "Using functional MRI to assess the impact of prematurity and perinatal brain injury on brain function." Pediatric Academic Societies, Annual Meeting, San Diego, California, 2015.

Zubiaurre-Elorza, L., Linke, A.C., Wild, C., Herzmann, C., Duffy, H., Lee, D.S.C., Han, V., & Cusack, R. "Developmental differences in auditory structural connectivity." Pediatric Academic Societies, Annual Meeting, San Diego, California, 2015.

Wild, C., Linke, A.C., Zubiaurre-Elorza, L., Herzmann, C., Duffy, H., Han, V., Lee, D.S.C., & Cusack, R. "Measuring the development of auditory-language function in the first postnatal year with neuroimaging". Pediatric Academic Societies, Annual Meeting, San Diego, California, 2015. 

Linke, A.C., Wild, C., Zubiaurre-Elorza, L., Herzmann, C., Duffy, H., Lee, D., Han, V., & Cusack, R. "Optimizing fMRI for assessing auditory brain function in neonates". Invited Talk. Pediatric Research Day, London, Canada, 2014. 

Zubiaurre-Elorza, L., Linke, A., Herzmann, C., Wild, C., Duffy, H., & Cusack, R. "Development of thalamo-cortical connectivity during the first postnatal year". International Society for Developmental Neuroscience, Montreal, Canada, 2014. 

Wild, C., Linke, A.C., Zubiaurre-Elorza, L., Herzmann, C., Duffy, H., Lee, D., Han, V., & Cusack, R. "Optimizing auditory fMRI for infants and neonates". International Society for Developmental Neuroscience, Montreal, Canada, 2014. 

Linke, A.C., Wild., C., Zubiaurre-Elorza, L., Lee, D., Han.V., & Cusack, R. "Assessing perinatal brain injury using functional MRI". Canadian National Perinatal Research Meeting, Banff, Canada, 2014

Cusack, R., Stojanoski, B., Linke, A.C., Cameron, D., & Clay, D. "Using affordable neuroimaging technology to measure the newborn brain in East Africa". Western Global Health Research Workshop, 2014. 

Auer, T., Vicente-Grabovetsky, A., Mitchell, D.J, Wild, C., Linke, A.C., Peele, J.E., Cusack, R. "Automatic analysis (aa) pipelines: new features for large multimodal datasets." Human Brain Mapping, 2014. 

Linke, A.C., & Cusack, R. "Using neuroimaging and multi-voxel pattern analysis to study flexible coding in human auditory cortex". Invited Talk. New Ideas in Hearing Workshop: Sensory Processing: How the Past affects the Present, Paris, France, 2013. 

Linke, A.C., Matthews, M., Gati, J., & Cusack, R. "Using ultra high-field fMRI and multivariate methods to study neural representations of complex sounds in human auditory cortex". Invited Talk. Association for Research in Otolaryngology MidWinter Meeting, Young Investigator Symposium, Baltimore, 2013.

Cusack, R., Wild. C., Arichi T., Gelman, N., & Linke, A. "Designing stimulation protocols to maximize sensitivity in neonatal fMRI". European Society of Paediatric Radiology, Porto, Portugal, 2013. 

Linke, A.C., & Cusack, R. “Decoding feature information in human auditory cortex - a comparison of auditory perception, short-term memory and imagery”. The Journal of the Acoustical Society of America, 131, 3386. Invited Talk, Acoustics, Hong Kong, China, 2012.  

Linke, A.C., & Cusack, R. “Task-dependent feature representations of complex sounds in human auditory cortex.” Computational and Systems Neuroscience (Cosyne), Salt Lake City, 2012. 

Linke, A.C., & Cusack, R. “Remembering by imagining? Auditory short-term memory and imagery do not share the same neural mechanisms.” Human Brain Mapping, Quebec City, 2011.

Naci, L., Linke, A., Vicente-Grabovetsky, A., Gaudrin, E., Monti, M., Owen, A., & Cusack, R. “Using multi-voxel pattern analysis to decode the targets of auditory selective attention and imagery.” International Conference on Cognitive Neuroscience, Mallorca, Spain, 2011.

Linke, A.C., Vicente-Grabovetsky, A., Mitchell, D.J., & Cusack, R. “Individual Differences in Change Detection Measures of Short-Term Memory Capacity can be explained by Encoding Strategy.” Cognitive Neuroscience Society Annual Meeting, San Francisco, 2011.

Linke, A., & Cusack, R. “Complex sounds decoded – processing semantic and perceptual features in the auditory system.” Human Brain Mapping, Barcelona, 2010.

Cusack, R., Veldsman, M., Naci, L., Mitchell, D.J., & Linke, A. “Ventral visual tuning to sensory and semantic features differs by object.” Experimental Psychology Society, Manchester, 2010.

Cusack, R., Veldsman, M., Naci, L., Mitchell, D.J., & Linke, A. “Rapidly characterising multidimensional neural tuning to sensory and semantic features of real-world objects using Dynamically Adaptive Imaging.” Cognitive Neuroscience Society, Montreal, 2010

Linke, A., & Cusack, R. “Assessing Tonotopy in Human Audition during a Change Detection Task – A Multi-Voxel Pattern Analysis Approach.” Association for Research in Otolaryngology MidWinter Meeting, Los Angeles, 2010.